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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888928.1_cds_XP_016443588.1_38732
CDS Infomation

[gene=LOC107768931] [db_xref=GeneID:107768931] [protein=histidine decarboxylase-like] [protein_id=XP_016443588.1] [location=join(7374..7397,7891..8119,8855..9089,9604..9797,9907..10043,10350..10928)] [gbkey=CDS]
Sequence

ATGGGAAGCTTATCATTTGAGAAGGAATTTGAGCCATCGGCAGTAACTCCCAGAGGATTG
GCACCACCTGGTTTAATAGGAAATGGAGATTTTGGAGAAATGAAAAGACTAAAGGTGGCA
ACACCAACTGCACCAAGGAAGAACTTGAATATTACAGTGACAGAGCCAGGGTCCAGAAAT
GATGGACAAAGTCTCGACTGTATTTTGATGAATTATATTGACACACTTTCCCAACGTATC
AACTATCATATAGGTTATCCAGTGAACATATGCTATGAGCACTACGCTAGCTTAGCCCCA
CTATTGCAATTCCACTTGAATAATTGTGGTGATCCCTTTCTTCAAAACACAGTGGATTTT
CATTCAAAAGATTTCGAAGTGGCTGTTTTGAATTGGTTTGCAGATTTATGGGAAATTGAA
AAAGATCAATATTGGGGTTATGTTACAAATGGTGGTACAGAAGGAAATCTCCATGGCATT
TTGGTTGGGAGAGAATTACTTCCAACTGGGATCTTATATGCATCAAAAGACTCTCATTAT
TCGGTCGCCAAAGCTGCAATGATGTACAGAATGGACTTTGAAATGGTTAATACATCAGTA
CATGGAGAAATGGACTATTCAGATTTGAAAGTAAAATTACTTCAAAACAAGGGCAAACCA
GCAATAATTAATGTTACAATTGGTACTACCTTCAAAGGAGCTGTTGATGATCTTGATGTT
ATTCTTCAAACACTTAAAGATTGTGGTTATACATATGATCAATTTTACATCCACTGTGAT
GCAGCACTTAATGGGCTTATTATCCCTTTTATTAAAAATATGATTTCATTCAAGAAACCA
ATTGGAAGCGTCACAATTTCTGGTCACAAGTTCTTGGGATGTCCAATGCCTTGTGGAATT
CAAATAACAAGAAAAAGTTACATTAACAATCTCTCAAGAAAAGTTGAGTATATTGCTTCA
GTAGATGCCACAATTTCTGGAAGCAGAAATGGTTTAGCTCCAATATTCCTGTGGTATAGT
TTAAGCGCTAAAGGTCAAGTTGGACTACAAAAAGACGTTAAGAGATGCCTTGACAATGCC
AAATACTTAAAAGATCGTCTTCAACAAGCAGGAATCAGTGTCATGCTCAATGAACTTAGT
ATCATAGTTGTCTTGGAGAGACCTCGTGACCATGAATTTGTTCGTCGTTGGCAGCTTTCT
TGTGTGAGAGATATGGCACATGTTATTGTTATGCCAGGTATAACCAGAGAAATCTTGGAC
AGTTTCATCAATGATTTATTGCAACAAAGGAAAAAATGGTACAAAGATGGAAATGTTACA
CCTCCTTGTGTTGCAGAAGATATTGGTGCCCAAAATTGTGCTTGCTCTTACCACAAAATT
GATTTCATTATCCCATAG

Peptide Sequence

PEP ID

XP_016443588.1
PEP Infomation

PREDICTED: histidine decarboxylase-like [Nicotiana tabacum]
Sequence

MGSLSFEKEFEPSAVTPRGLAPPGLIGNGDFGEMKRLKVATPTAPRKNLNITVTEPGSRN
DGQSLDCILMNYIDTLSQRINYHIGYPVNICYEHYASLAPLLQFHLNNCGDPFLQNTVDF
HSKDFEVAVLNWFADLWEIEKDQYWGYVTNGGTEGNLHGILVGRELLPTGILYASKDSHY
SVAKAAMMYRMDFEMVNTSVHGEMDYSDLKVKLLQNKGKPAIINVTIGTTFKGAVDDLDV
ILQTLKDCGYTYDQFYIHCDAALNGLIIPFIKNMISFKKPIGSVTISGHKFLGCPMPCGI
QITRKSYINNLSRKVEYIASVDATISGSRNGLAPIFLWYSLSAKGQVGLQKDVKRCLDNA
KYLKDRLQQAGISVMLNELSIIVVLERPRDHEFVRRWQLSCVRDMAHVIVMPGITREILD
SFINDLLQQRKKWYKDGNVTPPCVAEDIGAQNCACSYHKIDFIIP

Transcript Sequence

Gene sequence data has not been registered.